Create raster of leading vegetation types and Plot a bar chart summary and a vegetation type map. NOTE: plot order will follow colors order.

plotVTM(speciesStack = NULL, vtm = NULL, vegLeadingProportion = 0.8,
  sppEquiv, sppEquivCol, colors, title = "Leading vegetation types")

Arguments

speciesStack

A RasterStack of percent-cover-by-species layers.

vtm

An optional vegetation type map (RasterLayer). If not supplied, will be produced internally by makeVegTypeMap.

vegLeadingProportion

The minimum proportion cover required to consider a species to be the "leading" one. Default 0.8.

sppEquiv

a species equivalency table TODO: description needed

sppEquivCol

the column name to use from sppEquiv.

colors

Named vector of colour codes, named using species names. NOTE: plot order will follow this order.

title

The title to use for the generated plots.